The following university units across the United States share the IU Islamic Studies Program's mission of advancing critical research about Islam and Muslim history, politics, culture, thought, and practice via curricular and collaborative initiatives, and event programming.
- Boston College: Islamic Civilization and Societies Program
- Boston University: Institute for the Study of Muslim Societies & Civilizations
- Brown University: Islam and the Humanities Initiative
- California State University, San Bernardino: Center for Islamic and Middle Eastern Studies
- University of Chicago: Mellon Islamic Studies Initiative
- Cornell University: Comparative Muslim Societies Program
- Duke-UNC: Carolina Center for the Study of the Middle East and Muslim Civilizations
- Duke University: Duke Islamic Studies Center
- University of Florida: Center for Global Islamic Studies
- George Mason University: Ali Vural Ak Center for Global Islamic Studies
- Georgetown University: Prince Alwaleed Bin Talal Center for Muslim-Christian Understanding
- Georgetown University: Department of Arabic and Islamic Studies
- Graduate Theological Union: Center for Islamic Studies
- Harvard Law School: Islamic Legal Studies Program
- Harvard University: Prince Alwaleed Bin Talal Islamic Studies Program
- The Johns Hopkins University: Program in Islamic Studies
- Lehigh University: Center for Global Islamic Studies
- University of Louisville: Middle East & Islamic Studies Program
- University of Michigan: Islamic Studies Program
- Michigan State University: Muslim Studies Program
- University of Nebraska, Omaha: Islamic Studies Program
- New York University: Department of Middle Eastern and Islamic Studies
- Northwestern University: Institute for the Study of Islamic Thought in Africa
- Princeton University: Princeton Islamic Studies Colloquium
- Stanford University: Abbasi Program in Islamic Studies
- Vanderbilt University: Interdisciplinary Program in Islamic Studies
- Villanova University: The Center for Arab & Islamic Studies
- Yale Law School: Abdallah S. Kamel Center for the Study of Islamic Law and Civilization